Purpose:
To investigate the gene
polymorphism of CYP2D6*10 (C188T) in the Hui people and
study its correlation between CYP2D6*10 gene mutation
and structure and function of its encoding protein.
Methods: 150 unrelated Hui ethnic
group volunteers participated in this study. A total of
500 µL heparin-treated blood from each volunteer was
extracted with the TIANGEN DNA Mini Kit. Allele specific
amplification PCR and Gene sequencing were used to
detect the CYP2D6 alleles *10. Bioinformatics and
computer modeling methods were used to predict the
spatial structure and function of the protein encoded by
the wild type gene and mutant gene.
Results:
The mutation frequency of
C188T allele (T) of CYP2D6*10 in Ningxia Hui people was
47.5 %, compared with Turkish (14.5 %), Ethiopia (8.6
%), Spanish (1.9 %), and they were significantly
different, (p < 0.01;) The result from ProtParam shows
that mutant protein was more unstable than the wild-type
protein. The isoelectric point, molecular weight and
hydrophilicity were similar in terms of mutant protein
and wild-type protein. Analysis of the gene sequence of
CYP2D6*10 using DNAStar/Protein software indicates that
the mutant protein had one more Gamier-Robson Turn while
MotifScan analysis showed that the wild-type protein had
2 P450 enzyme activation sites and that there was none
in the mutant protein. Analysis using SignalP
demonstrated that the wild-type protein had signal
peptide while the mutant protein had none. Analysis
using TMHMM Server showed that
both of them had a
transmembrane region. The foregoing differences between
the mutant protein and the wild-type protein could
influence the activity of CYP2D6.
Conclusion:
Gene mutation can change the
spatial structure and function of CYP2D6. This change
may be the main reason for the decreased activity of the
enzyme.
Keywords:
Polymorphism,
CYP2D6, Mutant, Allele, Protein, Gene, Bioinformatics,
Personalized medicine.